llkalook.blogg.se

This article demonstrates the MicrobiotaProcess for analyzing microbiome data as well as other ecological data through several examples.

Moreover, MicrobiotaProcess can interoperate with other packages in the R community, which further expands its analytical capabilities. This gives users the ability to explore data, conduct personalized analyses, and develop analysis workflows. These functions independently perform simple tasks and can be combined to perform complex tasks. Around this data structure, the downstream analysis tasks are decomposed and a set of functions are designed under a tidy framework. It provides a comprehensive data structure, MPSE, to better integrate the primary and intermediate data, which improves the integration and exploration of the downstream data. In response to these two issues, we designed and developed the MicrobiotaProcess package. There is still a lack of an effective data structure to represent and manage data, as well as flexible and composable analysis methods. The data output from microbiome research is growing at an accelerating rate, yet mining the data quickly and efficiently remains difficult.